USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: TCAL3_HUMAN USC-OGP 2-DE database:  TCAL3_HUMAN TCAL3_HUMAN General information about the entry View entry in simple text format Entry name TCAL3_HUMAN Primary accession number Q969E4 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Transcription elongation factor A protein-like 3; Short=TCEA-like protein 3; AltName: Full=Transcription elongation factor S-II protein-like 3;. Gene name Name=TCEAL3 ORFNames=MSTP072 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1246: pI=5.01; Mw=31502 Cross-references UniProtKB/Swiss-Prot Q969E4; TCAL3_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name TCAL3_HUMAN Primary accession number Q969E4 Secondary accession number(s) D3DXA4 Sequence was last modified on  December 1, 2001 (version 1) Annotations were last modified on  March 15, 2017 (version 112) Name and origin of the protein Description RecName: Full=Transcription elongation factor A protein-like 3; Short=TCEA-like protein 3; AltName: Full=Transcription elongation factor S-II protein-like 3; Gene name Name=TCEAL3 ORFNames=MSTP072 Encoded on Name=TCEAL3; ORFNames=MSTP072 Keywords Complete proteome; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Transcription; Transcription regulation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF163263; AAQ13592.1; -; mRNA EMBL AK098494; BAC05318.1; -; mRNA EMBL Z73965; CAI42029.1; -; Genomic_DNA EMBL CH471190; EAW54703.1; -; Genomic_DNA EMBL CH471190; EAW54704.1; -; Genomic_DNA EMBL BC007622; AAH07622.1; -; mRNA EMBL BC008703; AAH08703.1; -; mRNA CCDS CCDS14511.1; -; . RefSeq NP_001006934.1; NM_001006933.1; . RefSeq NP_116315.1; NM_032926.2; . UniGene Hs.311776; -; . ProteinModelPortal Q969E4; -; . IntAct Q969E4; 1; . STRING 9606.ENSP00000243286; -; . iPTMnet Q969E4; -; . PhosphoSitePlus Q969E4; -; . BioMuta TCEAL3; -; . DMDM 74762641; -; . EPD Q969E4; -; . MaxQB Q969E4; -; . PaxDb Q969E4; -; . PeptideAtlas Q969E4; -; . PRIDE Q969E4; -; . DNASU 85012; -; . Ensembl ENST00000243286; ENSP00000243286; ENSG00000196507; . Ensembl ENST00000372627; ENSP00000361710; ENSG00000196507; . Ensembl ENST00000372628; ENSP00000361711; ENSG00000196507; . GeneID 85012; -; . KEGG hsa:85012; -; . UCSC uc004ekq.4; human; . CTD 85012; -; . GeneCards TCEAL3; -; . H-InvDB HIX0203314; -; . HGNC HGNC:28247; TCEAL3; . HPA HPA045564; -; . HPA HPA058982; -; . neXtProt NX_Q969E4; -; . OpenTargets ENSG00000196507; -; . PharmGKB PA128394737; -; . eggNOG ENOG410JBBY; Eukaryota; . eggNOG ENOG41113V2; LUCA; . GeneTree ENSGT00510000046867; -; . HOGENOM HOG000231342; -; . HOVERGEN HBG055896; -; . InParanoid Q969E4; -; . OMA ERQPTHE; -; . OrthoDB EOG091G0HD3; -; . PhylomeDB Q969E4; -; . TreeFam TF336871; -; . ChiTaRS TCEAL3; human; . GenomeRNAi 85012; -; . PRO PR:Q969E4; -; . Proteomes UP000005640; Chromosome X; . Bgee ENSG00000196507; -; . CleanEx HS_TCEAL3; -; . Genevisible Q969E4; HS; . GO GO:0005634; C:nucleus; IEA:UniProtKB-SubCell; . GO GO:0006355; P:regulation of transcription; DNA-templated; IEA:UniProtKB-KW GO GO:0006351; P:transcription; DNA-templated; IEA:UniProtKB-KW InterPro IPR021156; TF_A-like/BEX; . Pfam PF04538; BEX; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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